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Research Article

Clusters of Internally Primed Transcripts Reveal Novel Long Noncoding RNAs

  • Masaaki Furuno equal contributor,

    equal contributor Contributed equally to this work with: Masaaki Furuno, Ken C Pang

    Affiliation: Mouse Genome Informatics Consortium, The Jackson Laboratory, Bar Harbor, Maine, United States of America

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  • Ken C Pang equal contributor,

    equal contributor Contributed equally to this work with: Masaaki Furuno, Ken C Pang

    Affiliations: Australian Research Council Special Research Centre for Functional and Applied Genomics, Institute for Molecular Bioscience, University of Queensland, Brisbane, Australia, T Cell laboratory, Ludwig Institute for Cancer Research, Austin Health, Heidelberg, Victoria, Australia

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  • Noriko Ninomiya,

    Affiliation: Genome Exploration Research Group (Genome Network Project Core Group), RIKEN Genomic Sciences Center, RIKEN Yokohama Institute, Yokohama, Japan

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  • Shiro Fukuda,

    Affiliation: Genome Exploration Research Group (Genome Network Project Core Group), RIKEN Genomic Sciences Center, RIKEN Yokohama Institute, Yokohama, Japan

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  • Martin C Frith,

    Affiliations: Australian Research Council Special Research Centre for Functional and Applied Genomics, Institute for Molecular Bioscience, University of Queensland, Brisbane, Australia, Genome Exploration Research Group (Genome Network Project Core Group), RIKEN Genomic Sciences Center, RIKEN Yokohama Institute, Yokohama, Japan

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  • Carol Bult,

    Affiliation: Mouse Genome Informatics Consortium, The Jackson Laboratory, Bar Harbor, Maine, United States of America

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  • Chikatoshi Kai,

    Affiliation: Genome Exploration Research Group (Genome Network Project Core Group), RIKEN Genomic Sciences Center, RIKEN Yokohama Institute, Yokohama, Japan

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  • Jun Kawai,

    Affiliations: Genome Exploration Research Group (Genome Network Project Core Group), RIKEN Genomic Sciences Center, RIKEN Yokohama Institute, Yokohama, Japan, Genome Science Laboratory, Discovery Research Institute, RIKEN Wako Institute, Wako, Japan

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  • Piero Carninci,

    Affiliations: Genome Exploration Research Group (Genome Network Project Core Group), RIKEN Genomic Sciences Center, RIKEN Yokohama Institute, Yokohama, Japan, Genome Science Laboratory, Discovery Research Institute, RIKEN Wako Institute, Wako, Japan

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  • Yoshihide Hayashizaki,

    Affiliations: Genome Exploration Research Group (Genome Network Project Core Group), RIKEN Genomic Sciences Center, RIKEN Yokohama Institute, Yokohama, Japan, Genome Science Laboratory, Discovery Research Institute, RIKEN Wako Institute, Wako, Japan

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  • John S Mattick,

    Affiliation: Australian Research Council Special Research Centre for Functional and Applied Genomics, Institute for Molecular Bioscience, University of Queensland, Brisbane, Australia

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  • Harukazu Suzuki mail

    To whom correspondence should be addressed. E-mail: rgscerg@gsc.riken.jp

    Affiliation: Genome Exploration Research Group (Genome Network Project Core Group), RIKEN Genomic Sciences Center, RIKEN Yokohama Institute, Yokohama, Japan

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  • Published: April 28, 2006
  • DOI: 10.1371/journal.pgen.0020037
  • Published in PLOS Genetics

About the Authors

Masaaki Furuno, Carol Bult
Mouse Genome Informatics Consortium, The Jackson Laboratory, Bar Harbor, Maine, United States of America
Ken C Pang, Martin C Frith, John S Mattick
Australian Research Council Special Research Centre for Functional and Applied Genomics, Institute for Molecular Bioscience, University of Queensland, Brisbane, Australia
Ken C Pang
T Cell laboratory, Ludwig Institute for Cancer Research, Austin Health, Heidelberg, Victoria, Australia
Noriko Ninomiya, Shiro Fukuda, Martin C Frith, Chikatoshi Kai, Jun Kawai, Piero Carninci, Yoshihide Hayashizaki, Harukazu Suzuki
Genome Exploration Research Group (Genome Network Project Core Group), RIKEN Genomic Sciences Center, RIKEN Yokohama Institute, Yokohama, Japan
Jun Kawai, Piero Carninci, Yoshihide Hayashizaki
Genome Science Laboratory, Discovery Research Institute, RIKEN Wako Institute, Wako, Japan

Corresponding Author

Email: rgscerg@gsc.riken.jp

Competing Interests

The authors have declared that no competing interests exist.

Author Contributions

MF, KCP, PC, YH, and HS conceived and designed the experiments. NN, SF, CK, and HS performed the experiments. MF, KCP, MCF, and HS analyzed the data. MF, CK, JK, PC, YH, and HS contributed reagents/materials/analysis tools. MF, KCP, CB, JSM, and HS wrote the paper.