Advertisement
Research Article

Optimizing Read Mapping to Reference Genomes to Determine Composition and Species Prevalence in Microbial Communities

  • John Martin,

    Affiliation: The Genome Institute, Washington University School of Medicine, St. Louis, Missouri, United States of America

    X
  • Sean Sykes,

    Affiliation: The Broad Institute of MIT and Harvard, Cambridge, Massachusetts, United States of America

    X
  • Sarah Young,

    Affiliation: The Broad Institute of MIT and Harvard, Cambridge, Massachusetts, United States of America

    X
  • Karthik Kota,

    Affiliation: The Genome Institute, Washington University School of Medicine, St. Louis, Missouri, United States of America

    X
  • Ravi Sanka,

    Affiliation: J. Craig Venter Institute, Rockville, Maryland, United States of America

    X
  • Nihar Sheth,

    Affiliation: Virginia Commonwealth University, Center for Study of Biological Complexity, Richmond, Virginia, United States of America

    X
  • Joshua Orvis,

    Affiliation: Insitute for Genome Sciences, University of Maryland School of Medicine, Baltimore, Maryland, United States of America

    X
  • Erica Sodergren,

    Affiliations: The Genome Institute, Washington University School of Medicine, St. Louis, Missouri, United States of America, Department of Genetics, Washington University School of Medicine, St. Louis, Missouri, United States of America

    X
  • Zhengyuan Wang,

    Affiliation: The Genome Institute, Washington University School of Medicine, St. Louis, Missouri, United States of America

    X
  • George M. Weinstock,

    Affiliations: The Genome Institute, Washington University School of Medicine, St. Louis, Missouri, United States of America, Department of Genetics, Washington University School of Medicine, St. Louis, Missouri, United States of America

    X
  • Makedonka Mitreva mail

    mmitreva@watson.wustl.edu

    Affiliations: The Genome Institute, Washington University School of Medicine, St. Louis, Missouri, United States of America, Department of Genetics, Washington University School of Medicine, St. Louis, Missouri, United States of America

    X
  • Published: June 13, 2012
  • DOI: 10.1371/journal.pone.0036427
  • Published in PLOS ONE

Reader Comments (0)

Post a new comment on this article